
By Thierry Langer, Rémy D. Hoffmann
This guide is the 1st to handle the sensible points of this novel strategy. It presents an entire assessment of the sector and progresses from common concerns to actual existence situations in drug discovery study.
beginning with an introductory ancient review, the authors circulate directly to talk about ligand-based techniques, together with 3D pharmacophores and 4D QSAR, in addition to the idea that and alertness of pseudoreceptors. the subsequent part on structure-based ways comprises pharmcophores from ligand-protein complexes, turn and 3D protein-ligand binding interactions. the complete is rounded off with a whole part dedicated to purposes and examples, together with modeling of ADME homes.
With its serious evaluate of pharmacophore-based options, this e-book represents a worthy relief for venture leaders and decision-makers within the pharmaceutical undefined, in addition to pharmacologists, and medicinal and chemists.
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Additional resources for Pharmacophores and Pharmacophore Searches
Sample text
1998, 35, 1091–1100. Hajduk, P. , Fesik, S. , Privileged molecules for protein binding identified from NMRbased screening. J. Med. Chem. 2000, 43, 3443–3447. , To bond or not to bond. Bull. Hist. Chem. 2003, 28. Earles, M. , Early theories of the mode of action of drugs and poisons. Ann. Sci. 1961 (publ. 1963), 17, 97–110. , Of the Reconcileableness of Specific Medicines to the Corpuscular Philosophy. Samuel Smith, London, 1685, pp. 72–75. , Die Arzneimittel-Synthese auf Grundlage der Beziehungen zwischen chemischem Aufbau und Wirkung.
8. Database searching: is a database search engine implemented in the program? g. substructure, pharmacophore, shape, exclusion? 9. Scoring of hits: Can database search hits be ranked? The currently available pharmacophore perception methods are reviewed here in three major categories: geometry- and feature-based methods, field-based methods and pharmacophore fingerprints. Finally, the methods that do not fall into any of the above categories are described in an additional section. 1 DISCO, GASP and GALAHAD The above programs are all currently implemented and marketed by Tripos and were developed by either the pharmaceutical industry or academic institutions and in cooperation with Tripos.
From magic bullets to designed multiple ligands. Drug Discov. Today 2004, 9, 641– 651. 13 Part II Pharmacophore Approaches Pharmacophores and Pharmacophore Searches. Edited by T. Langer and R. D. Hoffmann Copyright © 2006 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim ISBN: 3-527-31250-1 17 2 Pharmacophore Model Generation Software Tools Konstantin Poptodorov, Tien Luu, and Rémy D. 1 Introduction Although the concept of pharmacophores constituting a simple representation of molecules and chemical groups in certain order was introduced nearly a century ago [1], there has been increasing interest and focus on pharmacophores in recent years following the advances in computational chemistry research.